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BOFungalNetwork2D

BOFungalNetwork2D – Toolbox to Automatically Extract Complex Fungal Networks. 

BOFungalNetwork2D

Publications:

  • [2012,article] bibtex
    B. Obara, M. Fricker, and V. Grau, "A bioimage informatics approach to automatically extract complex fungal networks," Bioinformatics, vol. 28, iss. 18, pp. 2374-2381, 2012.
    @article{Obara2012f,
      author = {Boguslaw Obara and Mark Fricker and Vicente Grau},
      title = {A bioimage informatics approach to automatically extract complex fungal networks},
      journal = {Bioinformatics},
      volume = {28},
      number = {18},
      pages = {2374-2381},
      year = {2012}
    }
  • [2012,article] bibtex
    B. Obara, M. Fricker, D. Gavaghan, and V. Grau, "Contrast-independent curvilinear structure detection in biomedical images," IEEE Transactions on Image Processing, vol. 21, iss. 5, pp. 2572-2581, 2012.
    @article{Obara2012b,
      author = {Boguslaw Obara and Mark Fricker and David Gavaghan and Vicente Grau},
      title = {Contrast-independent curvilinear structure detection in biomedical images},
      journal = {IEEE Transactions on Image Processing},
      volume = {21},
      number = {5},
      pages = {2572-2581},
      year = {2012}
    }
  • [2012,article] bibtex
    L. Heaton, B. Obara, V. Grau, N. Jones, T. Nakagaki, L. Boddy, and M. Fricker, "Analysis of fungal networks," Fungal Biology Reviews, vol. 26, iss. 1, pp. 12-29, 2012.
    @article{Heaton2012,
      author = {Luke Heaton and Boguslaw Obara and Vincente Grau and Nick Jones and Toshiyuki Nakagaki and Lynne Boddy and Mark Fricker},
      title = {Analysis of fungal networks},
      journal = {Fungal Biology Reviews},
      volume = {26},
      number = {1},
      pages = {12-29},
      year = {2012}
    }
  • [2012,inproceedings] bibtex
    B. Obara, M. Fricker, and V. Grau, "Bioimage informatics for biomedical networks," in Oxford Systems Biology: Building Networks and Bridging Scales, Oxford, UK, 2012.
    @inproceedings{Obara2012e,
      author = {Boguslaw Obara and Mark Fricker and Vicente Grau},
      title = {Bioimage informatics for biomedical networks},
      booktitle = {Oxford Systems Biology: Building Networks and Bridging Scales},
      address = {Oxford, UK},
      month = {19-21 June},
      year = {2012}
    }
  • [2012,inproceedings] bibtex
    B. Obara, M. Fricker, and V. Grau, "Local phase approaches to extract biomedical networks," in IEEE International Symposium on Biomedical Imaging, Barcelona, Spain, 2012, pp. 1796-1799.
    @inproceedings{Obara2012d,
      author = {Boguslaw Obara and Mark Fricker and Vicente Grau},
      title = {Local phase approaches to extract biomedical networks},
      booktitle = {IEEE International Symposium on Biomedical Imaging},
      address = {Barcelona, Spain},
      pages = {1796-1799},
      month = {2-5 May},
      year = {2012}
    }
  • [2012,inproceedings] bibtex
    B. Obara, M. Fricker, and V. Grau, "Coherence enhancing diffusion filtering based on the Phase Congruency Tensor," in IEEE International Symposium on Biomedical Imaging, Barcelona, Spain, 2012, pp. 202-205.
    @inproceedings{Obara2012c,
      author = {Boguslaw Obara and Mark Fricker and Vicente Grau},
      title = {Coherence enhancing diffusion filtering based on the {Phase Congruency Tensor}},
      booktitle = {IEEE International Symposium on Biomedical Imaging},
      address = {Barcelona, Spain},
      pages = {202-205},
      month = {2-5 May},
      year = {2012}
    }
  • [2012,inproceedings] bibtex
    B. Obara, M. Fricker, and V. Grau, "Contrast independent detection of branching points in network-like structures," in SPIE Medical Imaging, San Diego, CA, USA, 2012, p. 83141.
    @inproceedings{Obara2012a,
      author = {Boguslaw Obara and Mark Fricker and Vicente Grau},
      title = {Contrast independent detection of branching points in network-like structures},
      booktitle = {SPIE Medical Imaging},
      address = {San Diego, CA, USA},
      pages = {83141L},
      month = {4-9 February},
      year = {2012}
    }